BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028B09SP1|AL428856
(859 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig97 1676 0.0
>3x_Contig97
Length = 1378
Score = 1676 bits (843), Expect = 0.0
Identities = 855/860 (99%), Gaps = 1/860 (0%)
Strand = Plus / Minus
Query: 1 ggtggatatcattaaaagaataatcgtagaaataaagaaaatattgacaacagcaagaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1300 ggtggatatcattaaaagaataatcgtagaaataaagaaaatattgacaacagcaagaac 1241
Query: 61 agcaacaagaacattaataataataataataataataataatmmcvataataatgataac 120
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 1240 agcaacaagaacattaataataataataataataataataatancgataataatgataac 1181
Query: 121 aaaaaaaatagtcgagatgatgatgacagtggaagtatagcaacaattgttatagtatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1180 aaaaaaaatagtcgagatgatgatgacagtggaagtatagcaacaattgttatagtatta 1121
Query: 181 gggacacttctagcaatgaggtctgacaaagtttaactatactcctcagcaatcggaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1120 gggacacttctagcaatgaggtctgacaaagtttaactatactcctcagcaatcggaact 1061
Query: 241 ggttcgatgtacttgccaatcgacttgtactcaagatcgtaaaatagttcaccaaatgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1060 ggttcgatgtacttgccaatcgacttgtactcaagatcgtaaaatagttcaccaaatgct 1001
Query: 301 cttgggccgccaatctctataccttttgcggtagtccatttgtcagatggtgcgaaaacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1000 cttgggccgccaatctctataccttttgcggtagtccatttgtcagatggtgcgaaaacc 941
Query: 361 ataaggtatacaagtaaaccgtattgataatcttgagtaccaatagcgttaccgttgttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 ataaggtatacaagtaaaccgtattgataatcttgagtaccaatagcgttaccgttgttg 881
Query: 421 tccaccaaggtgatcaaatctggtacacaacataacggtacttctgatccgtcttcattt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 tccaccaaggtgatcaaatctggtacacaacataacggtacttctgatccgtcttcattt 821
Query: 481 accttgtagcaaacgatattttcatttttaamaggaattctaattttggtttcatcaccc 540
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 820 accttgtagcaaacgatattttcatttttaaaaggaattctaattttggtttcatcaccc 761
Query: 541 tcagtgctttgcaatacaactacaccataaccatagcctcttttgatcatcttttctact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 tcagtgctttgcaatacaactacaccataaccatagcctcttttgatcatcttttctact 701
Query: 601 ccaattatcttgcccttcaataagcattttgcagctgaggaaccaccaactgcttcgata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 ccaattatcttgcccttcaataagcattttgcagctgaggaaccaccaactgcttcgata 641
Query: 661 attctagtaggtaagctatctatatcactggcagcccttgtaagatggacggcac-gcca 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 640 attctagtaggtaagctatctatatcactggcagcccttgtaagatggacggcacggcca 581
Query: 720 attctccatgagttagatatgggattaaaaatagtttcatttctcatttcatcacaggtc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 attctccatgagttagatatgggattaaaaatagtttcatttctcatttcatcacaggtc 521
Query: 780 atagacggctcaacgacagcacattgaacaccgtggttgtacattgcgtcacgtattaca 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 atagacggctcaacgacagcacattgaacaccgtggttgtacattgcgtcacgtattaca 461
Query: 840 tcctccatttgtacgtcatc 859
||||||||||||||||||||
Sbjct: 460 tcctccatttgtacgtcatc 441
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8886
Number of Sequences: 1807
Number of extensions: 8886
Number of successful extensions: 626
Number of sequences better than 1.0e-20: 1
length of query: 859
length of database: 10,358,551
effective HSP length: 16
effective length of query: 843
effective length of database: 10,329,639
effective search space: 8707885677
effective search space used: 8707885677
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)